PM

Publications & patents

Peer-reviewed papers, patents, preprints, and talks.

Mirrors my Google Scholar profile.

Peer-reviewed papers

Papers.

  1. 2024

    Preference optimization of protein language models as a multi-objective binder design paradigm

    P. Mistani, V. Mysore · ICLR 2024 Workshop on Generative and Experimental Perspectives for Biomolecular Design (GEM)

  2. 2023

    JAX-DIPS: Neural bootstrapping of finite discretization methods and application to elliptic problems with discontinuities

    P. A. Mistani, S. Pakravan, R. Ilango, F. Gibou · Journal of Computational Physics

  3. 2022

    Neuro-symbolic partial differential equation solver

    P. Mistani, S. Pakravan, R. Ilango, S. Choudhry, F. Gibou · NeurIPS 2022 Workshop on Machine Learning and the Physical Sciences (ML4PS)

  4. 2021

    Solving inverse-PDE problems with physics-aware neural networks (BiPDE)

    S. Pakravan, P. A. Mistani, M. A. Aragon-Calvo, F. Gibou · Journal of Computational Physics

  5. 2019

    A parallel Voronoi-based approach for mesoscale simulations of cell aggregate electropermeabilization

    P. Mistani, A. Guittet, C. Poignard, F. Gibou · Journal of Computational Physics

  6. 2018

    The island dynamics model on parallel quadtree grids

    P. Mistani, A. Guittet, D. Bochkov, J. Schneider, D. Margetis, C. Ratsch, F. Gibou · Journal of Computational Physics

  7. 2016

    On the assembly of dwarf galaxies in clusters and their efficient formation of globular clusters

    P. A. Mistani, L. V. Sales, A. Pillepich, R. Sanchez-Janssen, M. Vogelsberger, et al. · Monthly Notices of the Royal Astronomical Society (MNRAS)

Patents

Patents.

  1. 2025

    Multi-Agent Electronic Design Automation Framework

    P. Mistani (lead inventor), L. Francisco, M. Kahoush, S. Gupta, J. Walston · US Patent App. 63/831,018 · Synopsys

  2. 2024

    Multi-Objective Designed Molecules and Generation Thereof

    P. Mistani, V. Mysore · US Patent App. 63/560,686; 63/688,791 · Aikium

  3. 2024

    Multi-Objective Designed Protein Binders and Generation Thereof

    P. Mistani, V. Mysore · US Patent App. 63/550,587 · Aikium

Preprints & thesis

Preprints & thesis.

  1. 2020

    Large Scale Simulations and Stochastic Modeling of Interfacial Transport Processes

    P. Akbari Mistani · PhD Dissertation, UC Santa Barbara

  2. 2020

    A fractional stochastic theory for interfacial polarization of cell aggregates

    P. A. Mistani, S. Pakravan, F. G. Gibou · arXiv preprint

Book chapters

Book chapters.

  1. 2019

    Towards a tensor network representation of complex systems

    P. Mistani, S. Pakravan, F. Gibou · Sustainable Interdependent Networks II · Springer

  2. 2019

    Tensor network renormalization as an ultra-calculus for complex system dynamics

    P. Mistani, S. Pakravan, F. Gibou · Sustainable Interdependent Networks II · Springer

Conferences & posters

Conferences.

  1. 2018

    Multi-scale simulations of cell aggregate electropermeabilization

    P. Mistani, A. Guittet, C. Poignard, F. Gibou · Southern California Applied Mathematics Symposium (SOCAMS)

  2. 2018

    Multi-scale simulations of epitaxial growth: mound formation

    P. Mistani, F. Gibou · Southern California Applied Mathematics Symposium (SOCAMS)

  3. 2014

    Velocity dispersion profile of Cetus dwarf spheroidal galaxy

    P. A. Mistani, S. Sotoudeh · 8th Sackler Conference on Dark Matter, Harvard University

Open source

Code in the wild.

Merged contributions to upstream projects

Invited talks

Selected talks.

  1. 2023

    Neural operators for PDEs with interfacial jump conditions

    ICIAM 2023 · Tokyo · invited talk

  2. 2019

    A realistic tissue simulation engine

    SIAM CSE 2019 · Spokane · invited talk